Other●●Solid
Conserved amino acid contacts across 70k protein structures
654k conserved interactions across 70k structures, but unclear what biologists do with it.
Big BrainNiche Gem
xnullportx
104mo ago
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GitHub Repository
Structure inpainting and simulation-ready setup for proteins, DNA, RNA, and complexes
14 starsPython
Open-source GUI for editing 3D molecular structures with diffusion
by delibae·Jul 8, 2026·2 points·0 comments
AI Analysis
●●●BangerWizardryNiche GemSolve My Problem
99.4% connectivity pass rate on 66k PDB structures with native desktop app.
Strengths
- •Diffusion inpainting keeps existing coordinates exact while filling missing regions.
- •PATCHR Atlas has 66,417 multimeric structures pre-inpainted and browsable.
- •Native desktop builds for Windows, macOS, Linux with Colab notebook included.
Weaknesses
- •Highly specialized audience—only matters if you work with protein structures.
- •Backend support limited to Boltz-2 and Protenix currently.
Category
Target Audience
Structural biologists, computational chemistry researchers
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Rosetta · AlphaFold · ChimeraX
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